PEER REVIEWED PUBLICATIONS
Respiratory Diseases and Meningitis
2021
A Prospective Household cohort study of Influenza, Respiratory syncytial virus and other respiratory pathogens community burden and Transmission dynamics in South Africa, 2016-2018
Cohen C, McMorrow ML, Martinson NA, Kahn K, Treurnicht FK, Moyes J, Mkhencele T, Hellferscee O, Lebina L, Moroe M, Motlhaoleng K, Gómez-Olivé FX, Wagner R, Tollman S, Wafawanaka F, Ngobeni S, Kleynhans J, Mathunjwa A, Buys A, Maake L, Wolter N, Carrim M, Piketh S, Language B, Mathee A, von Gottberg A, Tempia S; PHIRST group
A Research and Development (R&D) roadmap for influenza vaccines: Looking toward the future
Moore KA, Ostrowsky JT, Kraigsley AM, Mehr AJ, Bresee JS, Friede MH, Gellin BG, Golding JP, Hart PJ, Moen A, Weller CL, Osterholm MT; Influenza Vaccines R&D Roadmap Taskforce (Cheryl Cohen contributed to manuscript)
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa
Wilkinson E, Giovanetti M, Tegally H, San JE, Lessells R, Cuadros D, Martin DP, Rasmussen DA, Zekri AN, Sangare AK, Ouedraogo AS, Sesay AK, Priscilla A, Kemi AS, Olubusuyi AM, Oluwapelumi AOO, Hammami A, Amuri AA, Sayed A, Ouma AEO, Elargoubi A, Ajayi NA, Victoria AF, Kazeem A, George A, Trotter AJ, Yahaya AA, Keita AK, Diallo A, Kone A, Souissi A, Chtourou A, Gutierrez AV, Page AJ, Vinze A, Iranzadeh A, Lambisia A, Ismail A, Rosemary A, Sylverken A, Femi A, Ibrahimi A, Marycelin B, Oderinde BS, Bolajoko B, haala B, Herring BL, Njanpop- Lafourcade BM, Kleinhans B, McInnis B, Tegomoh B, Brook C, Pratt CB, Scheepers C, Akoua-Koffi CG, Agoti CN, Peyrefitte C, Daubenberger C, Morang’a CM, Nokes DJ, Amoako DG, Bugembe DL, Park D, Baker D, Doolabh D, Ssemwanga D, Tshiabuila D, Bassirou D, Amuzu DSY, Goedhals D, Omuoyo DO, Maruapula D, Foster-Nyarko E, Lusamaki EK, Simulundu E, Ong’era EM, Ngabana EN, Shumba E, El Fahime E, Lokilo E, Mukantwari E, Philomena E, Belarbi E, Simon-Loriere E, Anoh EA, Leendertz F, Ajili F, Enoch FO, Wasfi F, Abdelmoula F, Mosha FS, Takawira FT, Derrar F, Bouzid F, Onikepe F, Adeola F, Muyembe FM, Tanser F, Dratibi FA, Mbunsu GK, Thilliez G, Kay GL, Githinji G, van Zyl G, Awandare GA, Schubert G, Maphalala GP, Ranaivoson HC, Lemriss H, Anise H, be H, Karray HH, Nansumba H, Elgahzaly HA, Gumbo H, Smeti I, Ayed IB, Odia I, Ben Boubaker IB, Gaaloul I, Gazy I, Mudau I, Ssewanyana I, Konstantinus I, Lekana-Douk JB, Makangara JC, Tamfum JM, Heraud JM, Shaffer JG, Giandhari J, Li J, Yasuda J, Mends JQ, Kiconco J, Morobe JM, Gyapong JO, Okolie JC, Kayiwa JT, Edwards JA, Gyamfi J, Farah J, Nakaseegu J, Ngoi JM, Namulondo J, Andeko JC, Lutwama JJ, O’Grady J, Siddle K, Adeyemi KT, Tumedi KA, Said KM, Hae-Young K, Duedu KO, Belyamani L, Fki-Berrajah L, Singh L, Martins LO, Tyers L, Ramuth M, Mastouri M, Aouni M, El Hefnawi M, Matsheka MI, Kebabonye M, Diop M, Turki M, Paye M, Nyaga MM, Mareka M, Damaris MM, Mburu MW, Mpina M, Nwando M, Owusu M, Wiley MR, Youtchou MT, Ayekaba MO, Abouelhoda M, Seadawy MG, Khalifa MK, Sekhele M, Ouadghiri M, Diagne MM, Mwenda M, Allam M, Phan MVT, Abid N, Touil N, Rujeni N, Kharrat N, Ismael N, Dia N, Mabunda N, Hsiao NY, Silochi NB, Nsenga N, Gumede N, Mulder N, Ndodo N, Razanajatovo NH, Iguosadolo N, udith O, Kingsley OC, Sylvanus O, Peter O, Femi O, Idowu O, Testimony O, Chukwuma OE, Ogah OE, Onwuamah CK, Cyril O, Faye O, Tomori O, Ondoa P, Combe P, Semanda P, Oluniyi PE, Arnaldo P, Quashie PK, Dussart P, Bester PA, Mbala PK, Ayivor-Djanie R, Njouom R, hillips RO, Gorman R, Kingsley RA, Carr RAA, El Kabbaj S, Gargouri S, Masmoudi S, Sankhe S, Lawal SB, Kassim S, Trabelsi S, Metha S, Kammoun S, Lemriss S, Agwa SHA, Calvignac-Spencer S, Schaffner SF, Doumbia S, Mandanda SM, Aryeetey S, Ahmed SS, Elhamoumi S, Andriamandimby S, Tope S, Lekana-Douki S, Prosolek S, Ouangraoua S, Mundeke SA, Rudder S, Panji S, Pillay S, Engelbrecht S, Nabadda S, Behillil S, Budiaki SL, van der Werf S, Mashe T, Aanniz T, Mohale T, Le-Viet T, Schindler T, Anyaneji UJ, Chinedu U, Ramphal U, essica U, George U, Fonseca V, Enouf V, Gorova V, Roshdy WH, Ampofo WK, Preiser W, Choga WT, Bediako Y, Naidoo Y, Butera Y, de Laurent ZR, Sall AA, Rebai A, von Gottberg A, Kouriba B, Williamson C, Bridges DJ, Chikwe I, Bhiman JN, Mine M, Cotten M, Moyo S, aseitsiwe S, Saasa N, Sabeti PC, Kaleebu P, Tebeje YK, Tessema SK, Happi C, Nkengasong J, de Oliveira T
Cytokine response in cerebrospinal fluid of meningitis patients and outcome associated with pneumococcal serotype
Müller A, Schramm DB, Kleynhans J, de Gouveia L, Meiring S, Ramette A, von Gottberg A, Hathaway LJ
Defining the seasonality of respiratory syncytial virus around the world: National and subnational surveillance data from 12 countries
Staadegaard L, Caini S, Wangchuk S, Thapa B, de Almeida WAF, de Carvalho FC, Fasce RA, Bustos P, Kyncl J, Novakova L, Caicedo AB, de Mora Coloma DJ, Meijer A, Hooiveld M, Huang QS, Wood T, Guiomar R, Rodrigues AP, Lee VJM, Ang LW, Cohen C, Moyes J, Larrauri A, Delgado-Sanz C, Demont C, Bangert M, Dückers M, van Summeren J, Paget J
Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016-2018: A hidden Markov modelling study
Thindwa D, Wolter N, Pinsent A, Carrim M, Ojal J, Tempia S, Moyes J, McMorrow M, Kleynhans J, Gottberg AV, French N; PHIRST group, Cohen C, Flasche S.
Risk Factors for Coronavirus Disease 2019 (COVID-19) Death in a Population Cohort Study from the Western Cape Province, South Africa
Western Cape Department of Health in collaboration with the National Institute for Communicable Diseases, South Africa. (Cheryl Cohen)
SARS-CoV-2 Seroprevalence in a Rural and Urban Household Cohort during First and Second Waves of Infections, South Africa, July 2020-March 2021
Kleynhans J, Tempia S, Wolter N, von Gottberg A, Bhiman JN, Buys A, Moyes J, McMorrow ML, Kahn K, Gómez-Olivé FX, Tollman S, Martinson NA, Wafawanaka F, Lebina L, du Toit J, Jassat W, Neti M, Brauer M, Cohen C; PHIRST-C Group.Emerg
Cohort profile: A Prospective Household cohort study of Influenza, Respiratory syncytial virus and other respiratory pathogens community burden and Transmission dynamics in South Africa, 2016 -2018
Cheryl Cohen, Meredith L. McMorrow, Neil A. Martinson, Kathleen Kahn, Florette K. Treurnicht, Jocelyn Moyes, Orienka Hellferscee, Thulisa Mkhencele, Limakatso Lebina, Matebejane Moroe, Katlego Motlhaoleng, Francesc Xavier Gomez-Olive, Ryan Wagner, Stephen Tollman, Floidy Wafawanaka, Sizzy Ngobeni, Jackie Kleynhans, Azwifari Mathunwa, Amelia Buys, Lorens Maake, Nicole Wolter, Maimuna Carrim, Stuart Piketh, Brigitte Language, Angela Mathee, Anne von Gottberg, Stefano Tempia.
Decline in Vaccine-Type Streptococcus pneumoniae Serotypes Following Pneumococcal Conjugate Vaccine Introduction in Madagascar
Raboba JL, Rahajamanana VL, Andriatahirintsoa EPR, Razafindrakoto AC, Andrianarivelo AM, Nimpa Mengouo M, Vuo Masembe Y, Weldegebriel GG, de Gouveia L, Mwenda JM, Robinson AL
Decline of influenza and respiratory syncytial virus detection in facility-based surveillance during the COVID-19 pandemic, South Africa, January to October 2020
Stefano Tempia, Sibongle Walaza, Jinal N Bhiman, Meredith L. McMorrow, Jocelyn Moyes, Thulisa Mkhencele, Susan Meiring, Vanessa Quan, Kate Bishop, Johanna M. McAnerney, Anne von Gottberg, Nicole Wolter, Mignon Du Plessis, Florette K. Treurnicht, Orienka Hellferscee, Halima Dawood, Fathima Naby, Ebrahim Variava, Comfort Siwele, Neydis Baute, Jeremy Nel, Gary Reubenson, Heather J. Zar, Cheryl Cohen.
Epidemiology of Pertussis in Individuals of All Ages Hospitalized With Respiratory Illness in South Africa, January 2013—December 2018
Wolter N, Cohen C, Tempia S, Walaza S, Moosa F, du Plessis M, McMorrow ML, Treurnicht FK, Hellferscee O, Dawood H, Variava E, von Gottberg A
Estimated impact of maternal vaccination on global paediatric influenza-related in-hospital mortality: A retrospective case series
Löwensteyn YN, Nair H, Nunes MC, van Roessel I, Vernooij FS, Willemsen J, Bont LJ, Mazur NI, on behalf of FLU GOLD collaborators (includes Cheryl Cohen and Sibongile Walaza)
Global Respiratory Syncytial Virus–Related Infant Community Deaths
Mazur NI, Löwensteyn YN, Willemsen JE, Gill CJ, Forman L, Mwananyanda LM, Blau DM, Breiman RF, Madhi SA, Mahtab S, Gurley ES, El Arifeen S, Assefa N, Scott JAG, Onyango D, Tippet Barr BA, Cohen C, Moyes J et al.
HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens
Fischer W, Giorgi EE, Chakraborty S, Nguyen K, Bhattacharya T, Theiler J, Goloboff PA, Yoon H, Abfalterer W, Foley BT, Tegally H, San JE, de Oliveira T, Wilkinson E, Msomi N, Iranzadeh A, Fonseca V, Doolabh D, Mlisana K, von Gottberg A, Walaza S, Allam M, Ismail A, Mohale T, Glass AJ, Engelbrecht S, Van Zyl G, Preiser W, Petruccione F, Sigal A, Hardie D, Marais G, Hsiao M, Korsman S, Davies MA, Tyers L, Mudau I, York D, Maslo C, Goedhals D, Abrahams S, Laguda-Akingba O, Alisoltani-Dehkordi A, Godzik A, Wibmer CK, Sewell BT, Lourenço J, Pond SLK, Weaver S, Giovanetti M, Alcantara LCJ, Martin D, Bhiman JN, Williamson C, Gnanakaran S, Korber B.
Human respiratory syncytial virus diversity and epidemiology among patients hospitalized with severe respiratory illness in South Africa, 2012 – 2015
Ziyaad Valley-Omar, Stefano Tempia, Orienka Hellferscee, Sibongile Walaza, Ebrahim Variava, Halima Dawood, Kathleen Kahn, Meredith MaMorrow, Marthi Pretorius, Senzo Mtshali, Ernest Mamorobela, Nicole Wolter, Marietjie Venter, Anne von Gotteberg, Cheryl Cohen,Florette K. Treurnicht.
Impact and effectiveness of 13-valent pneumococcal conjugate vaccine on population incidence of vaccine and non-vaccine serotype invasive pneumococcal disease in Blantyre, Malawi, 2006–18: prospective observational time-series and case-control studies
Bar-Zeev N, Swarthout TD, Everett DB, Alaerts M, Msefula J, Brown C, Bilima S, Mallewa J, King C, von Gottberg A, Verani JR, Whitney CG, Mwansambo C, Gordon SB, Cunliffe NA, French N, Heyderman RS
Influenza surveillance capacity improvements in Africa during 2011-2017. Influenza Other Respi Viruses
Igboh LS, McMorrow M, Tempia S, Walaza S, Cohen C et al.
Mortality in children aged <5 years with severe acute respiratory illness in a high HIV-prevalence urban and rural areas of South Africa, 2009–2013
Ayeni OA, Walaza S, Tempia S, Groome M, Kahn K, Madhi SA, Cohen AL, Moyes J, Venter M, Pretorius M, Treurnicht F, Hellferscee O, Von Gottberg A, Wolter N, Cohen C
SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse
Konings F, Perkins MD, Kuhn JH, Pallen MJ, Alm EJ, Archer BN, Barakat A, Bedford T, Bhiman JN, Caly L, Carter LL, Cullinane A, de Oliveira T, Druce J, El Masry I, Evans R, Gao GF, Gorbalenya AE, Hamblion E, Herring BL, Hodcroft E, Holmes EC, Kakkar M, Khare S, Koopmans MPG, Korber B, Leite J, MacCannell D, Marklewitz M, Maurer-Stroh S, Rico JAM, Munster VJ, Neher R, Munnink BO, Pavlin BI, Peiris M, Poon L, Pybus O, Rambaut A, Resende P, Subissi L, Thiel V, Tong S, van der Werf S, von Gottberg A, Ziebuhr J, Van Kerkhove MD.
The Burden of Invasive Bacterial Disease and the Impact of 10-Valent Pneumococcal Conjugate Vaccine in Children <5 years hospitalized for Meningitis in Lusaka, Zambia, 2010-2019
Yamba K, Mpabalwani E, Nakazwe R, Mulendele E, Weldegebriel G, Mwenda JM, Katsande R, de Gouveia L, Chizema-Kawesha E, Chanda R, Matapo B, Mwansa JCL, Lukwesa-Musyani C.
The Global Landscape of Pediatric Bacterial Meningitis Data Reported to the World Health Organization–Coordinated Invasive Bacterial Vaccine-Preventable Disease Surveillance Network, 2014–2019
Nakamura T, Cohen AL, Schwartz S, Mwenda JM, Weldegebriel G, Biey JNM, Katsande R, Ghoniem A, Fahmy K, Rahman HA, Videbaek D, Daniels D, Singh S, Wasley A, Rey-Benito G, de Oliveira L, Ortiz C, Tondo E, Liyanage JBL, Sharifuzzaman M, Grabovac V, Batmunkh N, Logronio J, Heffelfinger J, Fox K, De Gouveia L, von Gottberg A, Du Plessis M, Kwambana-Adams B, Antonio M, El Gohary S, Azmy A, Gamal A, Voropaeva E, Egorova E, Urban Y, Duarte C, Veeraraghavan B, Saha S, Howden B, Sait M, Jung S, Bae S, Litt D, Seaton S, Slack M, Antoni S, Ouattara M, Van Beneden C, Serhan F.
The Role of Molecular Testing in Pediatric Meningitis Surveillance in Southern and East African Countries, 2008-2017
du Plessis M, de Gouveia L, Freitas C, Abera NA, Lula BS, Raboba JL, Nhantumbo AA, Jantjies E, Uwimana J, Phungwayo N, Maphalala G, Masona G, Muyombe J, Mugisha D, Nalumansi E, Odongkara M, Lukwesa-Musyani C, Nakazwe R, Dondo V, Macharaga J, Weldegebriel GG, Mwenda JM, Serhan F, Cohen AL, Lessa FC, von Gottberg A
Role of vaccines in preventing influenza in healthy children
Sambala EZ, Cooper S, Schmidt BM, Walaza S, Wiysonge CS
A cross-sectional study measuring contact patterns using diaries in an urban and a rural community in South Africa, 2018
Kleynhans J, Tempia S, McMorrow ML, von Gottberg A, Martinson NA, Kahn K, Moyes J, Mkhencele T, Lebina L, Gómez-Olivé FX, Wafawanaka F, Mathunjwa A, Cohen C, Buys A, Mathee A, Language B, Maake L, Treurnicht F, Mothlaoleng K, Carrim M, Wolter N, Hellferscee O, Wagner RG, Piketh S
Asymptomatic transmission and high community burden of seasonal influenza in an urban and a rural community in South Africa, 2017-18 (PHIRST): a population cohort study
Cohen C, Kleynhans J, Moyes J, McMorrow ML, Treurnicht FK, Hellferscee O, Mathunjwa A, von Gottberg A, Wolter N, Martinson NA, Kahn K, Lebina L, Mothlaoleng K, Wafawanaka F, Gómez-Olivé FX, Mkhencele T, Mathee A, Piketh S, Language B, Tempia S
Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data
Brueggemann AB, Jansen van Rensburg MJ, Shaw D, McCarthy ND, Jolley KA, Maiden MCJ, van der Linden MPG, Amin-Chowdhury Z, Bennett DE, Borrow R, Brandileone MCC, Broughton K, Campbell R, Cao B, Casanova C, Choi EH, Chu YW, Clark SA, Claus H, Coelho J, Corcoran M, Cottrell S, Cunney RJ, Dalby T, Davies H, de Gouveia L, Deghmane AE, Demczuk W, Desmet S, Drew RJ, du Plessis M, Erlendsdottir H, Fry NK, Fuursted K, Gray SJ, Henriques-Normark B, Hale T, Hilty M, Hoffmann S, Humphreys H, Ip M, Jacobsson S, Johnston J, Kozakova J, Kristinsson KG, Krizova P, Kuch A, Ladhani SN, Lâm TT, Lebedova V, Lindholm L, Litt DJ, Martin I, Martiny D, Mattheus W, McElligott M, Meehan M, Meiring S, Mölling P, Morfeldt E, Morgan J, Mulhall RM, Muñoz-Almagro C, Murdoch DR, Murphy J, Musilek M, Mzabi A, Perez-Argüello A, Perrin M, Perry M, Redin A, Roberts R, Roberts M, Rokney A, Ron M, Scott KJ, Sheppard CL, Siira L, Skoczyńska A, Sloan M, Slotved HC, Smith AJ, Song JY, Taha MK, Toropainen M, Tsang D, Vainio A, van Sorge NM, Varon E, Vlach J, Vogel U, Vohrnova S, von Gottberg A, Zanella RC, Zhou F
Cross-Reactive Neutralizing Antibody Responses Elicited by SARS-CoV-2 501Y.V2 (B.1.351)
Moyo-Gwete T, Madzivhandila M, Makhado Z, Ayres F, Mhlanga D, Oosthuysen B, Lambson BE, Kgagudi P, Tegally H, Iranzadeh A, Doolabh D, Tyers L, Chinhoyi LR, Mennen M, Skelem S, Marais G, Wibmer CK, Bhiman JN, Ueckermann V, Rossouw T, Boswell M, de Oliveira T, Williamson C, Burgers WA, Ntusi N, Morris L, Moore PL
Detection of a SARS-CoV-2 variant of concern in South Africa
Tegally H, Wilkinson E, Giovanetti M, Iranzadeh A, Fonseca V, Giandhari J, Doolabh D, Pillay S, San EJ, Msomi N, Mlisana K, von Gottberg A, Walaza S, Allam M, Ismail A, Mohale T, Glass AJ, Engelbrecht S, Van Zyl G, Preiser W, Petruccione F, Sigal A, Hardie D, Marais G, Hsiao N yuan, Korsman S, Davies MA, Tyers L, Mudau I, York D, Maslo C, Goedhals D, Abrahams S, Laguda-Akingba O, Alisoltani-Dehkordi A, Godzik A, Wibmer CK, Sewell BT, Lourenço J, Alcantara LCJ, Kosakovsky Pond SL, Weaver S, Martin D, Lessells RJ, Bhiman JN, Williamson C, de Oliveira T
Efficacy of the ChAdOx1 nCoV-19 Covid-19 Vaccine against the B.1.351 Variant
Madhi SA, Baillie V, Cutland CL, Voysey M, Koen AL, Fairlie L, Padayachee SD, Dheda K, Barnabas SL, Bhorat QE, Briner C, Kwatra G, Ahmed K, Aley P, Bhikha S, Bhiman JN, Bhorat AE, du Plessis J, Esmail A, Groenewald M, Horne E, Hwa S-H, Jose A, Lambe T, Laubscher M, Malahleha M, Masenya M, Masilela M, McKenzie S, Molapo K, Moultrie A, Oelofse S, Patel F, Pillay S, Rhead S, Rodel H, Rossouw L, Taoushanis C, Tegally H, Thombrayil A, van Eck S, Wibmer CK, Durham NM, Kelly EJ, Villafana TL, Gilbert S, Pollard AJ, de Oliveira T, Moore PL, Sigal A, Izu A
Escape of SARS-CoV-2 501Y.V2 from neutralization by convalescent plasma
Cele S, Gazy I, Jackson L, Hwa SH, Tegally H, Lustig G, Giandhari J, Pillay S, Wilkinson E, Naidoo Y, Karim F, Ganga Y, Khan K, Bernstein M, Balazs AB, Gosnell BI, Hanekom W, Moosa MYS, Abrahams S, Alcantara LCJ, Alisoltani-Dehkordi A, Allam M, Bhiman JN, Davies MA, Doolabh D, Engelbrecht S, Fonseca V, Giovanetti M, Glass AJ, Godzik A, Goedhals D, Hardie D, Hsiao M, Iranzadeh A, Ismail A, Korsman S, Pond SLK, Laguda-Akingba O, Lourenco J, Marais G, Martin D, Maslo C, Mlisana K, Mohale T, Msomi N, Mudau I, Petruccione F, Preiser W, San EJ, Sewell BT, Tyers L, Van Zyl G, von Gottberg A, Walaza S, Weaver S, Wibmer CK, Williamson C, York D, Archary M, Dullabh KJ, Goulder P, Harilall S, Harling G, Harrichandparsad R, Herbst K, Jeena P, Khoza T, Klein N, Kløverpris H, Leslie A, Madansein R, Marakalala M, Mazibuko M, Moshabela M, Mthabela N, Naidoo K, Ndhlovu Z, Ndung’u T, Nyamande K, Padayatchi N, Patel V, Ramjit D, Rodel H, Smit T, Steyn A, Wong E, Lessells RJ, de Oliveira T, Sigal A
Global burden of acute lower respiratory infection associated with human parainfluenza virus in children younger than 5 years for 2018: a systematic review and meta-analysis
Wang X, Li Y, Deloria-Knoll M, Madhi SA, Cohen C, Arguelles VL, Basnet S, Bassat Q, Brooks WA, Echavarria M, Fasce RA, Gentile A, Goswami D, Homaira N, Howie SRC, Kotloff KL, Khuri-Bulos N, Krishnan A, Lucero MG, Lupisan S, Mathisen M, McLean KA, Mira-Iglesias A, Moraleda C, Okamoto M, Oshitani H, O’Brien KL, Owor BE, Rasmussen ZA, Rath BA, Salimi V, Sawatwong P, Scott JAG, Simões EAF, Sotomayor V, Thea DM, Treurnicht FK, Yoshida L-M, Zar HJ, Campbell H, Nair H
Global landscape review of serotype-specific invasive pneumococcal disease surveillance among countries using PCV10/13: The pneumococcal serotype replacement and distribution estimation (PSERENADE) project
Knoll MD, Bennett JC, Quesada MG, Kagucia EW, Peterson ME, Feikin DR, Cohen AL, Hetrich MK, Yang Y, Sinkevitch JN, Ampofo K, Aukes L, Bacci S, Bigogo G, Brandileone MCC, Bruce MG, Camilli R, Castilla J, Chan G, Chacón GC, Ciruela P, Cook H, Corcoran M, Dagan R, Danis K, de Miguel S, De Wals P, Desmet S, Galloway Y, Georgakopoulou T, Hammitt LL, Hilty M, Ho PL, Jayasinghe S, Kellner JD, Kleynhans J, Knol MJ, Kozakova J, Kristinsson KG, Ladhani SN, Lara CS, León ME, Lepp T, Mackenzie GA, Mad’arová L, McGeer A, Mungun T, Mwenda JM, Pekka Nuorti J, Nzoyikorera N, Oishi K, De Oliveira LH, Paragi M, Pilishvili T, Puentes R, Rafai E, Saha SK, Savrasova L, Savulescu C, Anthony Scott J, Scott KJ, Serhan F, Setchanova LP, Zorko NS, Skoczyńska A, Swarthout TD, Valentiner-Branth P, van der Linden M, Vestrheim DF, von Gottberg A, Yildirim I, Hayford K, Alarcon P, Almeida SCG, Amin-Chowdhury Z, Ang M, Avdicová M, Bilima S, Born R, Bruden D, Byington CL, Chamorro G, Chow KH, Chuluunbat U, Cohen C, Colzani E, Dalby T, Deceuninck G, Dimina E, du Plessis M, Erlendsdottir H, Gierke R, Gilkison C, Givon-Lavi N, Guevara M, Hasanuzzaman M, Hossain I, Kawabata A, Klein NP, Krause V, Krizova P, Kuch A, Lefebvre B, MacDonald L, Magaziotou I, Mereckiene J, Morfeldt E, Muñoz-Almagro C, Nakamura T, Pelton SI, Pennington K, Ploy MC, Rey-Benito G, Riccardo F, Ricketson LJ, Russell F, Sánchez Eluchans NM, Sanz JC, Suga S, Sutcliffe CG, Thoon KC, Toropainen M, Tzanakaki G, Valenzuela MT, van Sorge NM, Varon E, Verani JR, Winje BA, Zerouali K
HIV infection as risk factor for death among hospitalized persons with Candidemia, South Africa
Govender NP, Todd J, Nel J, Mer M, Karstaedt A, Cohen C, Black J, Abrahams S, Pearce V, Hoosen A, Kleinhans V, Moncho M, Maluleka C, Verwey C, Feldman C, Moore D, Reubenson G, Han KSS, Wadula J, Lindeque K, Nchabeleng M, Samodien N, du Plessis N, Mbelle N, Maningi N, Bosman N, Kularatne R, Seetharam S, Thomas T, Avenant T, Nana T, Chibabhai V, Maharj A, Burra A, Naby F, Dawood H, Mogamberry J, Mlisana K, Sookan L, Ramjathan P, Mahabeer P, Naidoo R, Haffejee S, Coovadia Y, Dlamini N, Sirkar S, Hamese K, Sibiya N, Lekalakala R, Hoyland G, Lebudi J, Jooste P, Variava E, du Plessis E, Whitelaw A, Reddy K, Nicol M, Naicker P, Bamford C, Brink A, Hoosien E, Prentice E, Zietsman I, Botha M, Smith P, Marshall T, Poswa X, Govind C, Smit J, Pillay K, Seetharam S, Budavari S, Howell V, Haumann C, Samuel C, Senekal M, Dreyer A, Ahmed K, Marcus L, Lowman W, Messina A, van den Bergh D, Swart K, Nanoo A, Dreyer A, von Gottberg A, Smith A, Sooka A, Miller C, Sriruttan C, Ihekweazu C, von Mollendorf C, du Plessis D, van Schalkwyk E, Ismail F, Radebe F, Ntshoe G, Hunt G, Mathema H, Ismail H, Weyer J, Kleynhans J, Rossouw J, Frean J, Ebonwu J, Mwansa-Kambafwile J, Keddy K, McCarthy K, Shuping L, de Gouveia L, Erasmus L, Blumberg L, Smith M, Makgoba M, Modise M, Ismail N, Govender N, Legare N, Page N, Ramalwa N, Paulse N, Vazi P, Perovic O, Crowther-Gibson P, Mutevedzi P, Manesen R, Kularatne R, Mpembe R, Lengana S, Madhi S, Omar SV, Walaza S, Lindani S, Njikho S, Meiring S, Motladiile T, Lebaka T, Quan V, Chetty V, Naicker S, Maphanga T, Mhlanga M, Zulu TG, Tsotetsi E, Matlapeng P, Kutta S, Qoza L, Mogokotleng S, Dube M, Shilubane A
Proposal for human respiratory syncytial virus nomenclature below the species level
Salimi V, Viegas M, Trento A, Agoti CN, Anderson LJ, Avadhanula V, Bahl J, Bont L, Brister JR, Cane PA, Galiano M, Graham BS, Hatcher EL, Hellferscee O, Henke DM, Hirve S, Jackson S, Keyaerts E, Kragten-Tabatabaie L, Lindstrom S, Nauwelaers I, Nokes DJ, Openshaw PJ, Peret TC, Piedra PA, Ramaekers K, Rector A, Trovão NS, von Gottberg A, Zambon M, Zhang W, Williams TC, Barr IG, Buchholz UJ
SARS-CoV-2 501Y.V2 escapes neutralization by South African COVID-19 donor plasma
Wibmer CK, Ayres F, Hermanus T, Madzivhandila M, Kgagudi P, Oosthuysen B, Lambson BE, de Oliveira T, Vermeulen M, van der Berg K, Rossouw T, Boswell M, Ueckermann V, Meiring S, von Gottberg A, Cohen C, Morris L, Bhiman JN, Moore PL
Serotype distribution of remaining pneumococcal meningitis in the mature PCV10/13 period: Findings from the PSERENADE Project
Quesada MG, Yang Y, Bennett JC, Hayford K, Zeger SL, Feikin DR, Peterson ME, Cohen AL, Almeida SCG, Ampofo K, Ang M, Bar-Zeev N, Bruce MG, Camilli R, Chacón GC, Ciruela P, Cohen C, Corcoran M, Dagan R, De Wals P, Desmet S, Diawara I, Gierke R, Guevara M, Hammitt LL, Hilty M, Ho PL, Jayasinghe S, Kleynhans J, Kristinsson KG, Ladhani SN, McGeer A, Mwenda JM, Pekka Nuorti J, Oishi K, Ricketson LJ, Sanz JC, Savrasova L, Setchanova LP, Smith A, Valentiner-Branth P, Valenzuela MT, van der Linden M, van Sorge NM, Varon E, Winje BA, Yildirim I, Zintgraff J, Knoll MD, Zahin Amin-Chowdhury, Born R, Brandileone MCC, Bruden D, Byington CL, Cameron C, Castilla J, Chan G, Chow KH, Dalby T, Danis K, de Gouveia L, de Miguel S, Deceuninck G, Del Manso M, Díaz J, Dimina E, Erlendsdottir H, Givon-Lavi N, Kellner JD, Knol MJ, Lefebvre B, Mereckiene J, Muñoz-Almagro C, Napoli D, Nzoyikorera N, Pelton SI, Pennington K, Pilishvili T, Ploy MC, Puentes R, Suga S, Sutcliffe CG, Swarthout TD, Thoon KC, Toropainen M, Vestrheim DF, von Gottberg A
Temporal variations in respiratory syncytial virus epidemics, by virus subtype, 4 countries
Staadegaard L, Meijer A, Rodrigues AP, Huang S, Cohen C, Demont C, Van Summeren J, Caini S, Paget J
The African Network for Improved Diagnostics, Epidemiology and Management of common infectious Agents
Schubert G, Achi V, Ahuka S, Belarbi E, Bourhaima O, Eckmanns T, Johnstone S, Kabore F, Kra O, Mendes A, Ouedraogo AS, Poda A, Some AS, Tomczyk S, Couacy-Hymann E, Kayembe JM, Meda N, Muyembe Tamfum JJ, Ouangraoua S, Page N, Venter M, Leendertz FH, Akoua-Koffi C, Kouadio VA, Aka-Tano A, Diarrassouba A, Anoh E, Traoré A, Sounan FT, Karidioula S, Kizito GM, Izizag BB, Mpwekela N, Kabengele B, Alama N, Tshiani O, Lusamaki EK, Muyembe B, Mitongo N, Manienga J, Lionzo F, Mbandu A, Makiala S, Sin MA, Gröschner K, Köhler S, Niendorf S, Nowak K, Pitzinger P, Sachse A, Vietor AC, Thomas J, Walaza S, de Gouveia L, von Mollendorf C, Quan V, Keddy K, Smith A, Ramalwa N, Avenant T, du Plessis N, Menu K, Pretorius M, McIntyre C, Bonnet E, Jeal R
A cost-effectiveness analysis of South Africa’s seasonal influenza vaccination programme
Edoka I, Kohli-Lynch C, Fraser H, Hofman K, Tempia S, McMorrow M, Ramkrishna W, Lambach P, Hutubessy R, Cohen C
Changes in invasive pneumococcal disease caused by streptococcus pneumoniae serotype 1 following introduction of pcv10 and pcv13: Findings from the pserenade project
Bennett JC, Hetrich MK, Quesada MG, Sinkevitch JN, Knoll MD, Feikin DR, Zeger SL, Kagucia EW, Cohen AL, Ampofo K, Brandileone MCC, Bruden D, Camilli R, Castilla J, Chan G, Cook H, Cornick JE, Dagan R, Dalby T, Danis K, de Miguel S, De Wals P, Desmet S, Georgakopoulou T, Gilkison C, Grgic‐vitek M, Hammitt LL, Hilty M, Ho PL, Jayasinghe S, Kellner JD, Kleynhans J, Knol MJ, Kozakova J, Kristinsson KG, Ladhani SN, Macdonald L, Mackenzie GA, Mad’arová L, McGeer A, Mereckiene J, Morfeldt E, Mungun T, Muñoz‐almagro C, Nuorti JP, Paragi M, Pilishvili T, Puentes R, Saha SK, Khan AS, Savrasova L, Scott JA, Skoczyńska A, Suga S, van der Linden M, Verani JR, von Gottberg A, Winje BA, Yildirim I, Zerouali K, Hayford K
Epidemiology of Pertussis in Individuals of all ages hospitalized with respiratory illness in South Africa, January 2013- December 2018
Wolter N, Cohen C, Tempia S, Walaza S, Moosa F, de Plessis M, McMorrow ML, Treurnicht FK, Hellferscee O, Dawood H, Variava E, von Gottberg A
Estimated impact of the pneumococcal conjugate vaccine on pneumonia mortality in South Africa, 1999 through 2016: An ecological modelling study
Kleynhans J, Tempia S, Shioda K, von Gottberg A, Weinberger DM, Cohen C
Global burden of acute lower respiratory infection associated with human metapneumovirus in children under 5 years in 2018: a systematic review and modelling study
Wang X, Li Y, Deloria-Knoll M, Madhi SA, Cohen C, Ali A, Basnet S, Bassat Q, Brooks WA, Chittaganpitch M, Echavarria M, Fasce RA, Goswami D, Hirve S, Homaira N, Howie SRC, Kotloff KL, Khuri-Bulos N, Krishnan A, Lucero MG, Lupisan S, Mira-Iglesias A, Moore DP, Moraleda C, Nunes M, Oshitani H, Owor BE, Polack FP, O’Brien KL, Rasmussen ZA, Rath BA, Salimi V, Scott JAG, Simões EAF, Strand TA, Thea DM, Treurnicht FK, Vaccari LC, Yoshida LM, Zar HJ, Campbell H, Nair H, Libster R, Otieno G, Joundi I, Broor S, Nicol M, Amarchand R, Shi T, López-Labrador FX, Baker JM, Jamison A, Choudekar A, Juvekar S, Obermeier P, Schweiger B, Madrid L, Thomas E, Lanaspa M, Nohynek H, Nokes J, Werner M, Danhg A, Chadha M, Puig-Barberà J, Caballero MT, Mathisen M, Walaza S, Hellferscee O, Laubscher M, Higdon MM, Haddix M, Sawatwong P, Baggett HC, Seidenberg P, Mwanayanda L, Antonio M, Ebruke BE, Adams T, Rahman M, Rahman MZ, Sow SO, Baillie VL, Workman L, Toizumi M, Tapia MD, Nguyen T hien anh, Morpeth S
Global burden of influenza-associated lower respiratory tract infections and hospitalizations among adults: A systematic review and meta-analysis
Lafond KE, Porter RM, Whaley MJ, Suizan Z, Ran Z, Aleem MA, Thapa B, Sar B, Proschle VS, Peng Z, Feng L, Coulibaly D, Nkwembe E, Olmedo A, Ampofo W, Saha S, Chadha M, Mangiri A, Setiawaty V, Ali SS, Chaves SS, Otorbaeva D, Keosavanh O, Saleh M, Ho A, Alexander B, Oumzil H, Baral KP, Huang QS, Cohen C, et al
Housing quality in a rural and an urban settlement in south africa
Mathee A, Moyes J, Mkhencele T, Kleynhans J, Language B, Piketh S, Moroe E, Wafawanaka F, Martinson N, McMorrow M, Tempia S, Kahn K, Cohen C
Molecular diagnostic assays for the detection of common bacterial meningitis pathogens: A narrative review
Diallo K, Feteh VF, Ibe L, Antonio M, Caugant DA, du Plessis M, Deghmane A-E, Feavers IM, Fernandez K, Fox LM, Rodrigues CMC, Ronveaux O, Taha M-K, Wang X, Brueggemann AB, Maiden MCJ, Harrison OB
Sixteen novel lineages of SARS-CoV-2 in South Africa
Tegally H, Wilkinson E, Lessells RJ, Giandhari J, Pillay S, Msomi N, Mlisana K, Bhiman JN, von Gottberg A, Walaza S, Fonseca V, Allam M, Ismail A, Glass AJ, Engelbrecht S, Van Zyl G, Preiser W, Williamson C, Petruccione F, Sigal A, Gazy I, Hardie D, Hsiao N yuan, Martin D, York D, Goedhals D, San EJ, Giovanetti M, Lourenço J, Alcantara LCJ, de Oliveira T.
